Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry | Nature Communications
Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry | Nature Communications
General workflows for processing DIA spectra. (A) Generation of... | Download Scientific Diagram
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics | Nature Communications
Hybrid Spectral Library Combining DIA-MS Data and a Targeted Virtual Library Substantially Deepens the Proteome Coverage - ScienceDirect
Mass-spectrometric exploration of proteome structure and function | Nature
Data‐independent acquisition‐based SWATH‐MS for quantitative proteomics: a tutorial | Molecular Systems Biology
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics | Nature Communications
Mass spectrometry and proteomics
DIA mass spectrometry | Nature Methods
Robust, reproducible and quantitative analysis of thousands of proteomes by micro-flow LC–MS/MS | Nature Communications
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics | Nature Communications
Deep learning enables de novo peptide sequencing from data-independent-acquisition mass spectrometry | Nature Methods
Data‐independent acquisition‐based SWATH‐MS for quantitative proteomics: a tutorial | Molecular Systems Biology
Optimization of Experimental Parameters in Data-Independent Mass Spectrometry Significantly Increases Depth and Reproducibility
Simultaneous Improvement in the Precision, Accuracy, and Robustness of Label-free Proteome Quantification by Optimizing Data Manipulation Chains | Molecular & Cellular Proteomics
Mass spectrometry and proteomics
Quantifying Plant Dynamic Proteomes by SWATH-based Mass Spectrometry: Trends in Plant Science
Data-independent acquisition mass spectrometry (DIA-MS) for proteomic applications in oncology - Molecular Omics (RSC Publishing) DOI:10.1039/D0MO00072H
PulseDIA: in-depth data independent acquisition mass spectrometry using enhanced gas phase fractionation | bioRxiv
Discovering cellular protein‐protein interactions: Technological strategies and opportunities - Titeca - 2019 - Mass Spectrometry Reviews - Wiley Online Library
SWATH-MS – Institute of Molecular Systems Biology | ETH Zurich
CompMS | MS-DIAL
Data-independent acquisition mass spectrometry (DIA-MS) for proteomic applications in oncology - Molecular Omics (RSC Publishing) DOI:10.1039/D0MO00072H
PulseDIA: in-depth data independent acquisition mass spectrometry using enhanced gas phase fractionation | bioRxiv
SWATH mass spectrometry as a tool for quantitative profiling of the matrisome - ScienceDirect
